If you ran Negotiator tb ships p1,
Then did the Endurance capital ship event,
(even if just open event-start-auto, ie no manual change of your ships)
Then if you go to tb for ships in p2...
Your capital ship in tb will be ENDURANCE, not NEGOTIATOR, and all your remaining ships will be in the same order you last manually placed them.
They look the same and it’s easily overlooked...
This appears to be due to a feature where the capital ship is changed automatically for the Endurance event.
I lost my tb ships this way, it made me not happy