I guess it would be cool if weapons were equip able.
DC 15A, can be used be anyone, but clones get another special or basic when equipped.
E5, can be used by anyone, grants extra special or basic to separatists.( cannot be used by B2 )
Red Crystal lightasaber, can be used by any darksider, but grants bonus damage on aoe attacks by Sith and Asajj.
T21 light repeating blaster rifle- Grants bonus attack chance to Emipre characters, can also be used by Clones and Droids.
1...2...3! You're dead!
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Gear - Mk 2 BlasTech Compressors, Mk 3 Powercell, etc.
Mods - Burst Cell- boosts damage, reduces potency
Durasteel mesh body- Increases speed, decreases defence
Stuff like this which actually modifies attributes, doesn't blindly boost some.
I'd be cool with weapon customization but maybe keep the power creep real low. It's more about making your toons look different.
But, while some people would like that, if it werent' a game changer it wouldn't garner interest so it would fall to the wayside. So, probably wont happen.